Training materials
Related resources: Introduction to Galaxy dataset or ARROWSMITH or User Interface and Features dataset or Workshop FAIR & Data stewardship for the 2020 I... or Transcriptomics dataset
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Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq