Training materials
Related resources: GEEM or Epigenetics dataset or Transcriptomics dataset or EGA Submitter Portal Tutorial
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Video
EGA Submitter Portal Tutorial
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Epigenetics - DNA Methylation data analysis
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq