Training materials
Related resources: ARROWSMITH or GEEM or Introduction to Galaxy dataset or Next generation biobanking ontology (NGBO) or Slides | Introduction to the EGA and sharing se... or Variant Analysis dataset
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes