Training materials
Authors: Malachi Griffith or Dominik Frantisek Bucik or Vasundra Touré or Daniel Blankenberg
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
Video, E-learning
FAIR principles in practice for health data
• beginnerComputer science Data management FAIR data Medical informatics Standardisation and normalisation Design Clinical data RDF Knowledge graph Semantic framework FAIR Findability Accessibility Interoperability Reusability -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial
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hands-on tutorial
Hands-on for 'PAPAA PI3K_OG: PanCancer Aberrant Pathway Activity Analysis' tutorial
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hands-on tutorial
Hands-on for 'Text-mining with the SimText toolset' tutorial
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hands-on tutorial
Hands-on for 'Peptide Library Data Analysis' tutorial
•• intermediateProteomics proteomics -
hands-on tutorial
Hands-on for 'Machine Learning Modeling of Anticancer Peptides' tutorial
•• intermediateProteomics proteomics ML cancer -
hands-on tutorial
Hands-on for 'NGS data logistics' tutorial
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slides
Slides for 'Reference Data with CVMFS' tutorial