Training materials
Tools: ORGANISMS or MGnify (was EBI Metagenomics) or BioSimulations or AlphaFold 2 or V-pipe
-
e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
Tutorial
Metagenomics Bioinformatics
-
Webinar
EBI Metagenomics: analysing and exploring metagenomics data
-
Analysing and visualising microbiome-derived datasets using the MGnify Web API
-
Documentation
BioSimulations tutorial and help
•• intermediateComputational biology Systems biology Simulation experiment Visualisation Modelling and simulation SystemsBiology ComputationalBiology Computational modelling Modeling Biomodelling Model Kinetic modeling SED-ML COMBINE -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining