Training materials
Related resources: CanCOGeN or DS Wizard ELIXIR-Norway or Introduction to Galaxy Analyses dataset or Next generation biobanking ontology (NGBO) or Proteomics dataset or Transcriptomics dataset
-
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Video
Annotating data using next generation biobanking ontology (NGBO)
• beginnerData integration and warehousing Ontology and terminology Standards Ontologies Data Integration data harmonization Standardised vocabulary -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
-
Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
-
Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
-
Tutorial
Introduction to Galaxy Analyses - From peaks to genes
-
Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
-
Tutorial
Transcriptomics - Differential abundance testing of small RNAs
-
Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq
- 1
- 2