Training materials
Related resources: Assembly dataset or Epigenetics dataset or GitHub or Introduction to Galaxy Analyses dataset or Public Health Alliance for Genomic Epidemiology or Transcriptomics slides
-
lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Assembly - Making sense of a newly assembled genome
-
Tutorial
Epigenetics - Hi-C analysis of Drosophila melanogaster cells using HiCExplorer
-
Tutorial
Assembly - Unicycler Assembly
-
Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
-
Tutorial
Assembly - De Bruijn Graph Assembly
-
Tutorial
Assembly - Introduction to Genome Assembly
-
Tutorial
Introduction to Galaxy Analyses - From peaks to genes
-
Tutorial
Epigenetics - DNA Methylation data analysis