Training materials
Difficulty level: Intermediate
and Keywords: Automation or Data analysis or computer-science or data stewardship or one-health
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediateGenetic variation variant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Identifying tuberculosis transmission links: from SNPs to transmission clusters' tutorial
•• intermediateEvolutionary biology evolution prokaryote one-health -
hands-on tutorial
Hands-on for 'Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring' tutorial
•• intermediateComputational chemistry computational-chemistry covid19 one-health -
Presentation
DSW Workshop for Finnish Data Support Personnel
•• intermediateData management DMP DMP tools data stewardship FAIR FAIR data -
Video, Slides, Webinar
DSW Template Development Kit: The Tutorial
•• intermediateData management data stewardship data management plan FAIR data management software tools DMP templates template development -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research
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