hands-on tutorial

Hands-on for 'Identifying tuberculosis transmission links: from SNPs to transmission clusters' tutorial

The objectives are:
- Create a SNP alignment
- Calculate pairwise SNP distances between MTB samples
- Identify transmission clusters based on SNP distances
- Study the emergence and spread of drug resistance based on transmission analysis.

Licence: Creative Commons Attribution 4.0 International

Keywords: evolution, prokaryote, one-health

Target audience: Students

Resource type: hands-on tutorial

Authors: Christoph Stritt, Daniela Brites, Galo A. Goig

Contributors: Christoph Stritt, Daniela Brites, Galo A. Goig

Scientific topics: Evolutionary biology


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