Training materials
Difficulty level: Intermediate
and Keywords: Alignment or Biomedical Literature or Metagenomics or assembly or bash
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateSequence assembly assembly covid19 -
hands-on tutorial
Hands-on for 'VGP assembly pipeline' tutorial
•• intermediateSequence assembly assembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateSequence assembly assembly pacbio -
hands-on tutorial
Hands-on for 'VGP assembly pipeline - short version' tutorial
•• intermediateSequence assembly assembly pacbio eukaryote VGP -
hands-on tutorial
Hands-on for 'CLI Educational Game - Bashcrawl' tutorial
•• intermediateSoftware engineering data-science game bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook -
slides
Slides for 'Deeper look into Genome Assembly algorithms' tutorial
•• intermediateSequence assembly assembly