hands-on tutorial

Hands-on for 'VGP assembly pipeline' tutorial

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The questions this addresses are:
- What combination of tools can produce the highest quality assembly of vertebrate genomes?
- How can we evaluate the quality of the assembly in a reference-free way?

The objectives are:
- Learn the tools necessary to perform a de novo assembly of a vertebrate genome
- Evaluate the quality of the assembly

Licence: Creative Commons Attribution 4.0 International

Keywords: assembly, pacbio, eukaryote, VGP

Target audience: Students

Resource type: hands-on tutorial

Authors: Alex Ostrovsky, Anna Syme, Brandon Pickett, Cristóbal Gallardo, Delphine Lariviere, Giulio Formenti, Linelle Abueg, Marcella Sozzoni

Contributors: Alex Ostrovsky, Anna Syme, Brandon Pickett, Cristóbal Gallardo, Delphine Lariviere, Giulio Formenti, Linelle Abueg, Marcella Sozzoni

Scientific topics: Sequence assembly

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