hands-on tutorial

Hands-on for 'VGP assembly pipeline - short version' tutorial

View material

The questions this addresses are:
- what combination of tools can produce the highest quality assembly of vertebrate genomes?
- How can we evaluate how good it is?

The objectives are:
- Learn the tools necessary to perform a de novo assembly of a vertebrate genome
- Evaluate the quality of the assembly

Licence: Creative Commons Attribution 4.0 International

Keywords: assembly, pacbio, eukaryote, VGP

Target audience: Students

Resource type: hands-on tutorial

Authors: Alex Ostrovsky, Brandon Pickett, Cristóbal Gallardo, Delphine Lariviere, Linelle Abueg

Contributors: Alex Ostrovsky, Brandon Pickett, Cristóbal Gallardo, Delphine Lariviere, Linelle Abueg

Scientific topics: Sequence assembly

Activity log