Training materials
Contributors: Celia van Gelder or Dr. Nils Gehlenborg or Joan Hérisson or Martin Čech or Pavankumar Videm or Sabine Österle
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Video, E-learning
FAIRification of external terminologies
• beginnerComputer science Data management FAIR data Medical informatics Ontology and terminology Clinical data Semantic Framework FAIR Terminology Ontology Versioning of Terminology -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell ATAC-seq Datasets' tutorial
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Video, E-Learning
How to create a concept for the SPHN Dataset
• beginnerComputer science Data management FAIR data Medical informatics Design Standardisation and normalisation Clinical data Semantic Framework FAIR Concepts design Ontology Semantic inheritance SNOMED CT Conceptualization -
hands-on tutorial
Hands-on for 'Evaluating and ranking a set of pathways based on multiple metrics' tutorial
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hands-on tutorial
Hands-on for 'Galaxy Webhooks' tutorial
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hands-on tutorial
Hands-on for 'Designing plasmids encoding predicted pathways by using the BASIC assembly method' tutorial
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hands-on tutorial
Hands-on for 'Generating theoretical possible pathways for the production of Lycopene in E.Coli using Retrosynthesis tools' tutorial
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hands-on tutorial
Hands-on for 'RNA-RNA interactome data analysis' tutorial
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hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial