Training materials
Contributors: Armando Arredondo or Erwan Corre or Mikko Rautiainen or Wolfgang Maier
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hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateassembly covid19 -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateassembly pacbio -
hands-on tutorial
Hands-on for 'De novo transcriptome assembly, annotation, and differential expression analysis' tutorial
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hands-on tutorial
Hands-on for 'Pre-processing of Single-Cell RNA Data' tutorial
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hands-on tutorial
Hands-on for 'Automating Galaxy workflows using the command line' tutorial
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hands-on tutorial
Hands-on for 'Removal of human reads from SARS-CoV-2 sequencing data' tutorial
•• intermediatesequence-analysis covid19 -
slides
An introduction to get started in genome assembly and annotation
• beginnerSequence assembly Assembly -
hands-on tutorial
Quality Control
• beginnerSequence analysis -
slides
Quality Control
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Documentation, Exercise, Handout, Scripts
CPANG19 - Computational PANGenomics (2019)
•• intermediateGenomics