Training materials
Contributors: Allegra Via or Anatole Chessel or Rob Finn or Beatriz Serrano-Solano
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hands-on tutorial
Hands-on for 'Whole transcriptome analysis of Arabidopsis thaliana' tutorial
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hands-on tutorial
Hands-on for 'Analysis of plant scRNA-Seq Data with Scanpy' tutorial
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hands-on tutorial
Hands-on for 'Object tracking using CellProfiler' tutorial
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hands-on tutorial
Hands-on for 'Nucleoli segmentation and feature extraction using CellProfiler' tutorial
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slides
Slides for 'Nucleoli Segmentation <br> & <br> Feature Extraction <br> using CellProfiler' tutorial
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Tutorial
Metagenomics Bioinformatics
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Documentation, Exercise, Handout, Scripts
PPB18 - Programming in Python for Biologists (2018)
•• intermediateData retrieval Data handling Bioinformatics Biology Biological databases -
Installation instructions, Manual
How to use Common Workflow Language
• beginnerWorkflows commonwl common workflow language CWL eLearning EeLP -
Jupyter notebook, PDF
Introductory image processing on biological images using python.
• beginner