Training materials
Difficulty level: Intermediate
and Authors: Mikael Linden or Nuwan Goonasekera or Personalized Health Informatics Group or Tuur Muyldermans
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Hands-on for 'Managing Galaxy on Kubernetes' tutorial
•• intermediateadmin kubernetes -
hands-on tutorial
Hands-on for 'Galaxy Installation on Kubernetes' tutorial
•• intermediateadmin kubernetes -
Video, Training materials, E-learning
Validate Graph Data with SHACL
•• intermediateMedical informatics FAIR data Data management Computer science Validation Data handling Clinical data SHACL Data validation RDF Knowledge graph GraphDB RDF graph validation -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Documentation, Presentation
ELIXIR AAI Engagement Meetings Materials
•• intermediateComputer science AAI IAM Authentication authorisation -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Training materials, Video
GA4GH Passports and ELIXIR AAI
•• intermediateAAI GA4GH Passports Auhtorisation -
Webinar, Presentation, Documentation
Integrating to ELIXIR AAI -- instructions for developers
•• intermediateComputer science AAI IAM Authentication authorisation -
Training on integration of services to ELIXIR AAI
•• intermediateAAI authentication Shibboleth