Training materials
Authors: Karel Berka or Daniel Blankenberg or Maria Lehtivaara or Erasmus+ Programme
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Training materials, Series of videos
Visium data analysis (spatially resolved transcriptomics) 2022
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AlphaFold2 - ML revolution in structural biology
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Karel Berka and Marian Novotný - Alphafoldology - Machine Learning revolution in structural biology
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Genomic Data Visualisation with JBrowse' tutorial
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hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (prokaryotes)' tutorial
•• intermediategenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Masking repeats with RepeatMasker' tutorial
• beginnergenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Genome assembly using PacBio data' tutorial
•• intermediateSequence assembly assembly pacbio -
hands-on tutorial
Hands-on for 'Pre-processing of 10X Single-Cell RNA Datasets' tutorial