Training materials
Authors: Janick Mathys or Bori Mifsud or Marius van den Beek or Simon Bray or Nicola Soranzo
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hands-on tutorial
R introduction
• beginnerR script Software engineering data visualisation programming -
hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
e-learning
Basic statistics in Prism
• beginnerStatistics and probability statistics -
e-learning
Basic statistics theory
• beginnerStatistics and probability statistics -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Calling variants in diploid systems' tutorial
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hands-on tutorial
Hands-on for 'Scripting Galaxy using the API and BioBlend' tutorial
• beginnerSoftware engineering dev jupyter-notebook -
hands-on tutorial
Hands-on for 'Contributing to BioBlend as a developer' tutorial
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hands-on tutorial
Hands-on for 'Single-cell quality control with scater' tutorial