hands-on tutorial

Hands-on for 'Single-cell quality control with scater' tutorial

The questions this addresses are:
- How to ensure the quality of single-cell RNA-seq data?
- What are the confounding factors that may affect the interpretation of downstream analyses?

The objectives are:
- Examine scRNA-seq data for low-quality cells
- Visualise data with various types of plots
- Filtering low-quality cells with the appropriate approach

Licence: Creative Commons Attribution 4.0 International

Keywords: single-cell, single-cell

Target audience: Students

Resource type: hands-on tutorial

Authors: Graham Etherington, Nicola Soranzo

Contributors: Graham Etherington, Nicola Soranzo

Scientific topics: Transcriptomics


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