Training materials
Difficulty level: Intermediate
and Authors: Fotis E. Psomopoulos or Gildas Le Corguillé or Lars Juhl Jensen or Malachi Griffith or Vasundra Touré
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Video, E-Learning
SPHN Dataset Template: Build an RDF schema from an Excel file
•• intermediateComputer science Data management FAIR data Medical informatics Semantic artifacts generation Automation Clinical data Semantic Framework FAIR RDF RDF graph generation Dataset template -
hands-on tutorial
Hands-on for 'Introduction to Machine Learning using R' tutorial
•• intermediateStatistics and probability statistics interactive-tools -
hands-on tutorial
Hands-on for 'Plotting in Python' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Advanced R in Galaxy' tutorial
•• intermediateSoftware engineering data-science R -
hands-on tutorial
Hands-on for 'Advanced Python' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Mass spectrometry: LC-MS preprocessing with XCMS' tutorial
•• intermediateMetabolomics metabolomics -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation