Training materials
Difficulty level: Intermediate
and Authors: Egon Willighagen or Eija Korpelainen or Gildas Le Corguillé or Janick Mathys or Lars Juhl Jensen
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Blog post
Making BridgeDb Derby files with Groovy
•• intermediateBridgeDb Groovy -
hands-on tutorial
Bulk RNASeq analysis
•• intermediateTranscriptomics Gene expression Differential gene expression profiling Expression analysis Data analysis NGS RNASeq transcriptomics -
hands-on tutorial
Hands-on for 'Mass spectrometry: LC-MS preprocessing with XCMS' tutorial
•• intermediateMetabolomics metabolomics -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
Tutorial
Adding nanomaterial data
•• intermediateToxicology Database management ontologies enanomapper RDF -
Entering and analysing nano safety data
•• intermediateontologies enanomapper -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
hands-on tutorial
NGS analysis
•• intermediateSequencing NGS Next Generation Sequencing