Training materials
Difficulty level: Intermediate
and Authors: Bazante Sanders or Gary Bader or Gildas Le Corguillé or Marta Lloret Llinares or erasche
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
hands-on tutorial
Hands-on for 'Python - Subprocess' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Python - Globbing' tutorial
•• intermediateSoftware engineering data-science jupyter-notebook -
hands-on tutorial
Hands-on for 'Make & Snakemake' tutorial
•• intermediateSoftware engineering data-science -
hands-on tutorial
Hands-on for 'Advanced CLI in Galaxy' tutorial
•• intermediateSoftware engineering data-science bash jupyter-notebook -
hands-on tutorial
Hands-on for 'Mass spectrometry: LC-MS preprocessing with XCMS' tutorial
•• intermediateMetabolomics metabolomics -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Video
Status Update Code of Conduct: Teaming up & Talking about it
•• intermediateGDPR Healthcare research data harmonization -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing