Training materials
Authors: Anthony Bretaudeau or Dayane Araujo or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Doyle or Marta Lloret Llinares or Wendi Bacon
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
Video
ELIXIR-CONVERGE - The why of research data management
• beginnerData management FAIR data Data submission, annotation, and curation Data security Data integration and warehousing Data Life Cycle Data Steward Data Data access management Data management plan Data managment plan Data handling ELIXIR-CONVERGE -
hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Genome annotation with Maker' tutorial
••• advancedgenome-annotation eukaryote -
hands-on tutorial
Hands-on for 'Functional annotation of protein sequences' tutorial
• beginnergenome-annotation eukaryote