Training materials
Authors: Anthony Bretaudeau or Björn Grüning or Jessica Kirkpatrick krkptrc2@illinois.edu or Maria Doyle or Marta Lloret Llinares or Wendi Bacon
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Learning pathway
Version control with Git
•• intermediateSoftware engineering Open science Version control -
slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'Comparing inferred cell compositions using MuSiC deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the bulk RNA-seq dataset for deconvolution' tutorial
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hands-on tutorial
Hands-on for 'Creating the single-cell RNA-seq reference dataset for deconvolution' tutorial
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slides
Slides for 'Galaxy from an administrator's point of view' tutorial
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hands-on tutorial
Hands-on for 'Genome Assembly Quality Control' tutorial
•• intermediateSequence assembly assembly quality control -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'Exome sequencing data analysis for diagnosing a genetic disease' tutorial