Training materials
Authors: Allegra Via or Bazante Sanders or Jessica Kirkpatrick krkptrc2@illinois.edu or Marius van den Beek or Obi Griffith or Simon Gladman
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hands-on tutorial
Hands-on for 'Use Apptainer containers for running Galaxy jobs' tutorial
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slides
Slides for 'Server Maintenance: Cleanup, Backup, and Restoration' tutorial
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hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediateGenetic variation variant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'Microbial Variant Calling' tutorial
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hands-on tutorial
Hands-on for 'Genome annotation with Prokka' tutorial
• beginnergenome-annotation prokaryote -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Oxford Nanopore MinION Data' tutorial
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hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerSequence assembly assembly prokaryote -
hands-on tutorial
Hands-on for 'Genome Assembly of MRSA using Illumina MiSeq Data' tutorial
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hands-on tutorial
Hands-on for 'An Introduction to Genome Assembly' tutorial
• beginnerSequence assembly assembly