Training materials
Tools: ORGANISMS or TargetMine or Cufflinks or Minimap2 or European Nucleotide Archive (ENA)
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Slides
Life Sciences Research Data Management 2023 Course by ELIXIR Norway
• beginnerData management Data submission, annotation, and curation Data handling Deposition Data retrieval -
lessons, e-learning
Introduction to Data Management Practices - Data publication
• beginnerData management Open science FAIR data FAIR CONVERGE -
Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
TargetMine tutorials Tutorials for an InterMine designed to help identify drug targets.
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
RNA-seq Analysis 2014 Module 4 - Isoform discovery and alternative expression