Register training material
4 materials found

Tools: ORGANISMS  or InterMineR 


InterMine user tutorial

InterMine integrates biological data sources, making it easy to query and analyse data. It is a downloadable platform that operators can install and integrate with their own systems.

InterMine is a generic model-based platform that is used to provide data to end users in many different life...

Keywords: Data querying, Data analysis, Data download, FAIR

Resource type: Tutorial

InterMine user manual

InterMine integrates biological data sources, making it easy to query and analyse data. It is a downloadable platform that operators can install and integrate with their own systems.

InterMine is a generic model-based platform that is used to provide data to end users in many different life...

Keywords: Data querying, data visualization, Data download, FAIR

Resource type: Documentation

InterMine operator manual

InterMine integrates biological data sources, making it easy to query and analyse data. It is a downloadable platform that operators can install and integrate with their own systems.

InterMine is a generic model-based platform that is used to provide data to end users in many different life...

Keywords: Data integration, Data analysis, Data publishing, FAIR

Resource type: Documentation

Text-mining exercises

Hands-on exercises using a variety of text-mining tools and databases based on text mining, to interpret the results from microbiome studies.

The exercises will teach you how to:

  • automatically highlight named entities in a web page
  • use named entity recognition for synonym-aware...

Scientific topics: Microbial ecology, Metagenomics, Natural language processing, Data mining