Training materials
Tools: ORGANISMS or Cufflinks or DISEASES or MouseMine or MGnify (was EBI Metagenomics)
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Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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MouseMine at MGI
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
STRING exercises
• beginnerBioinformatics Molecular interactions, pathways and networks Protein interactions -
Cytoscape stringApp exercises
•• intermediateBioinformatics Molecular interactions, pathways and networks Protein interactions Proteomics Data visualisation -
RNA-seq Analysis 2014 Module 4 - Isoform discovery and alternative expression