Training materials
Tools: MGnify (was EBI Metagenomics) or tidybulk or V-pipe or TargetMine or ISMARA
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e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Tutorial
A Tidy Transcriptomics introduction to RNA-Seq analyses
• beginnerRNA-Seq Differential Expression Gene Expression RNA-seq Transcriptomics -
Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
TargetMine tutorials Tutorials for an InterMine designed to help identify drug targets.