Training materials
Tools: InterMineR or MGnify (was EBI Metagenomics) or MaBoSS or ORGANISMS or PLAZA monocots or PhysiCell
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Online material, Recording, hands-on tutorial
MaBoSS: a tool for modelling biological systems
• beginnerMathematical modelling cancer Signalling boolean modelling logical modelling -
Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Training materials
PLAZA is a plant-oriented online resource for comparative, evolutionary and functional genomics
•• intermediateGenotype and phenotype Phylogenomics Evolutionary biology Comparative genomics Functional genomics Plant biology Comparison Visualisation Annotation plants Plants bioinformatics genomics Visualisation Annotation -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining