Training materials
Tools: ChEBI or Datanator or InterMineR or MGnify (was EBI Metagenomics) or PhysiCell or runBioSimulations
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
InterMine user tutorial
• beginnerData querying Data analysis Data download FAIR -
Documentation
InterMine user manual
• beginnerData querying data visualization Data download FAIR -
Documentation
InterMine operator manual
•• intermediateData integration Data analysis Data publishing FAIR