Training materials
Tools: Bioconductor or ChEBI or Cytoscape or MGnify (was EBI Metagenomics) or ORGANISMS or PhysiCell or V-pipe
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Tutorial, Presentation
Materials from 'Introduction to High Performance Computing for Life Scientists' course
•• intermediateComputational biology HPC GPU parallel computing -
e-learning
Use V-pipe to evaluate SARS-CoV-2 sequence variability
• beginnerVirology Sequence analysis SARS-CoV-2 Variant calling -
Identifier mapping with Cytoscape
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Tutorial
Metagenomics Bioinformatics
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Webinar
EBI Metagenomics: analysing and exploring metagenomics data
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Analysing and visualising microbiome-derived datasets using the MGnify Web API
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Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling -
Liftr & sbgr
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Talk
Discussion: Guidelines for submitting data to ExperimentHub