Training materials
Target audience: Chemists or Industry or Intermediate or Life scientists with programming skills or Undergraduate students or computational scientists
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lessons
AKKI andmehalduse seminar
• beginnerData management Data management plan -
hands-on tutorial
AlphaFold and friends on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction AlphaFold Database (13181) -
hands-on tutorial
A tour of Machine Learning
•• intermediateMachine learning Classification Deep Learning Machine Learning -
Slideshow, Training materials
Prediction of protein structures and complexes with AlphaFold on the HPC
•• intermediateProtein structure analysis Machine learning Structure prediction Structure visualisation Multiple sequence alignment AlphaFold Database (13181) -
Jupyter notebook
BioExcel Building Blocks (BioBB) Training Material
• beginnermolecular dynamics Docking Modeling life sciences -
Video
Ten simple rules for making training materials FAIR
• beginnerFAIR data Data handling FAIR ELIXIR-CONVERGE -
Series of videos, Video, youtube video
Introduction to research data management, data management planning and services provided by CSC – IT Center for Science
• beginnerDMP RDM plan research data management data management data management plan ELIXIR-CONVERGE CONVERGE -
Training materials
FAIR principles applied to bioinformatics
•• intermediateFAIR Reproducible Science Open science Data analysis Data processing -
Tutorial
SPARQLing Biology: a beginners course
• beginnerBiology Query and retrieval Sparql queries Sparql syntax -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science