Training materials
Scientific topics: Genetic variation or Metabolomics or Proteomics or Toxicology
and Resource type: hands-on tutorial or slides
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hands-on tutorial
Hands-on for 'Pox virus genome analysis from tiled-amplicon sequencing data' tutorial
••• advancedGenetic variation variant-analysis virology one-health -
hands-on tutorial
Hands-on for 'Mass spectrometry: GC-MS data processing (with XCMS, RAMClustR, RIAssigner, and matchms)' tutorial
•• intermediateMetabolomics metabolomics -
slides, scripts
Bioinformatics for Proteomics
• beginnerProteomics -
slides, R Shiny application
Proteomics Data Analysis (PDA)
•• intermediateProteomics proteomics quantitative proteomics -
hands-on tutorial
Hands-on for 'Avian influenza viral strain analysis from gene segment sequencing data' tutorial
•• intermediateGenetic variation variant-analysis virology -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'M. tuberculosis Variant Analysis' tutorial
•• intermediateGenetic variation variant-analysis prokaryote one-health -
hands-on tutorial
Hands-on for 'metaQuantome 3: Taxonomy' tutorial
•• intermediateProteomics proteomics microbiome -
hands-on tutorial
Hands-on for 'Label-free versus Labelled - How to Choose Your Quantitation Method' tutorial
• beginnerProteomics proteomics DDA