Training materials
Scientific topics: Biosciences or Computer science or Data visualisation
and Resource type: Jupyter notebook or Mock data or e-learning
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e-learning
Methods and resources for omics studies: A curated collection of EMBL-EBI on-demand training
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lessons, e-learning
Introduction to Data Management Practices - Scripted analysis with R
• beginnerData management FAIR data Bioinformatics Data visualisation RStudio CONVERGE ggPlot -
e-learning
Make sense of COVID-19 data
• beginnerVirology Data visualisation SARS-CoV-2 -
e-learning
Explore and Visualize Your Data with Python
•• intermediateData visualisation Bioinformatics Python Data analysis -
e-learning
Cellosaurus : A resource on cell lines
• beginnerBiosciences Experimental design and studies basic research Reproducibility cell line -
e-learning
ResOps: Cloud-native tools and technology for researchers
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Video, Training materials, Mock data, E-learning
RDF Schema and Data Visualization
• beginnerData visualisation Medical informatics FAIR data Data management Computer science Ontology visualisation Visualisation Data retrieval Data handling Query and retrieval Clinical data SPARQL Data visualization RDF Knowledge graph GraphDB Mock data -
Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
examples, Tutorial, Jupyter notebook, API reference
DE-Sim examples, tutorials, and documentation
••• advancedSimulation experiment Computer science Mathematics Computational biology Modelling and simulation Visualisation data-driven modeling Computational modelling discrete-event simulation DES object-oriented programming Python data visualization Data Science
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