Training materials
Related resources: Transcriptomics dataset or Genome Annotation slides or Ready For BioData Management? or HoloFood Project
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Tutorial
Transcriptomics - CLIP-Seq data analysis from pre-processing to motif detection
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Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Transcriptomics - Reference-based RNA-Seq data analysis
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Tutorial
Transcriptomics - Differential abundance testing of small RNAs
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Tutorial
Transcriptomics - De novo transcriptome reconstruction with RNA-Seq