Training materials
Related resources: Proteomics dataset or Event or ARROWSMITH or Slides | Beacon v2: a discovery tool for genomi... or MetaboLights
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Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Training materials
Containers & Workflow pipelines workshop
•• intermediateContainers Nextflow -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Proteomics - Peptide and Protein Quantification via Stable Isotope Labelling (SIL)
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Tutorial
Proteomics - Peptide and Protein ID using SearchGUI and PeptideShaker
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Tutorial
Proteomics - Secretome Prediction
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Tutorial
Proteomics - Metaproteomics tutorial