Training materials
Related resources: Genome Annotation slides or GitHub or OpenRefine or Sequence analysis slides or Variant Analysis dataset or recorded presentation on integration of ELNs in...
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lessons, e-learning
Introduction to Data Management Practices - Versioning of data and code using Git
• beginnerData management FAIR data Software engineering RStudio CONVERGE README -
lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
Presentation, hackathon
ELN basics training materials
• beginner -
Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
Sequence analysis - Mapping
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Tutorial
Sequence analysis - Quality Control