Training materials
Related resources: DS Wizard ELIXIR-Norway or Genome Annotation dataset or OpenRefine or Public Health Alliance for Genomic Epidemiology or Variant Analysis dataset or Workshop FAIR & Data stewardship for the 2020 I...
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lessons, e-learning
Introduction to Data Management Practices - Cleaning tabular data with OpenRefine
• beginnerData management Open science FAIR data FAIR CONVERGE -
Slidedeck
Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Slides
Data Management Planning workshop for new Life Science Projects
• beginnerData management Deposition Data handling Data retrieval data management plan NeLS TSD metadata sensitive data publication data protection storage identifiers DMP licensing Compliance data life cycle - collect data life cycle - reuse data life cycle - analyse data life cycle - process data life cycle - preserve data life cycle - share data life cycle - plan -
Video
Applying data standards to the harmonization of COVID-19 datasets from different sources
• beginnerData integration and warehousing Data integration Standards Standardised vocabulary data harmonization Ontologies -
Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Variant Analysis - Exome sequencing data analysis