Training materials
Related resources: COBRA Toolbox or Chipster or GEEM or Genome Annotation dataset or Ready For BioData Management? or Variant Analysis dataset
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Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Slides, Training materials, Series of videos
Single-cell RNA-seq data analysis using Chipster 2022
• beginnerscRNA-seq -
Tutorial
Genome Annotation - Genome annotation with Prokka
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Tutorial
Genome Annotation - Genome Annotation
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Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Variant Analysis - Exome sequencing data analysis