Training materials
Related resources: Assembly slides or Data Visualisation (theory) or GPAP: the RD-Connect Genome-Phenome Analysis Pl... or Proteomics dataset or Variant Analysis dataset or Workshop FAIR & Data stewardship for the 2021 I...
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Video, Presentation
Introduction to the EGA and its Ecosystem of Tools
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Slidedeck
Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle
• beginnerData management FAIR data Data handling Analysis Data analysis Data management planning Data processing Data sharing Data collection Data preserving Data reuse -
Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
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Tutorial
Variant Analysis - Microbial Variant Calling
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Tutorial
Variant Analysis - Calling variants in non-diploid systems
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Proteomics - Peptide and Protein ID using OpenMS tools
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Tutorial
Variant Analysis - Exome sequencing data analysis
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Tutorial
Assembly - De Bruijn Graph Assembly
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