Training materials
Related resources: Assembly dataset or COBRA Toolbox or GEEM or Variant Analysis dataset or seq-seq-pan
-
Pan genomics tutorial using Minima2 and seq-seq-pan
• beginnerpan genomics genome alignment Minimap2 alignment seq-seq-pan R visualization genome alignment -
Video
Annotating data using ontologies
• beginnerData management Data integration and warehousing Ontology and terminology Ontologies Annotation Data integration -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
-
Tutorial
Assembly - Making sense of a newly assembled genome
-
Tutorial
Variant Analysis - Mapping and molecular identification of phenotype-causing mutations
-
Tutorial
Variant Analysis - Microbial Variant Calling
-
Tutorial
Variant Analysis - Calling variants in non-diploid systems
-
Tutorial
Assembly - Unicycler Assembly
-
Tutorial
Variant Analysis - Exome sequencing data analysis
-
Tutorial
Assembly - De Bruijn Graph Assembly
- 1
- 2