Training materials
Related resources: Assembly dataset or COBRA Toolbox or Data Visualisation (theory) or Introduction to Galaxy Analyses dataset or MGnify or Metagenomics dataset
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lessons
Visualisation with RStudio
• beginnerData visualisation Data Visualization R RStudio ggplot2 -
Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
Assembly - Making sense of a newly assembled genome
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Tutorial
Assembly - Unicycler Assembly
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Tutorial
Assembly - De Bruijn Graph Assembly
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Tutorial
Assembly - Introduction to Genome Assembly
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Tutorial
Introduction to Galaxy Analyses - From peaks to genes
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Tutorial
Metagenomics - Analyses of metagenomics data - The global picture
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Tutorial
Metagenomics - 16S Microbial Analysis with Mothur