Training materials
Related resources: ARROWSMITH or Assembly slides or COBRA Toolbox or MGnify or Transcriptomics slides or User Interface and Features dataset
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Slides, course materials, hands-on tutorial
Organisation and utilisation of hologenomic datasets – course notes
•• intermediateMetatranscriptomics Sample collections Metabolomics Metagenomics hologenomics metagenomics MGnify Workshop -
Tutorial
Constraint-based reconstruction and analysis toolbox tutorials
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Tutorial
User Interface and Features - Jupyter: Use Jupyter notebooks in Galaxy
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Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Tutorial
Assembly - Unicycler Assembly
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Tutorial
Transcriptomics - Visualization of RNA-Seq results with CummeRbund
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Tutorial
Assembly - De Bruijn Graph Assembly
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Tutorial
Assembly - Introduction to Genome Assembly