Training materials
Scientific topics: Biomedical science or Chemical biology or Medical informatics or Natural language processing or RNA
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Video, Training materials, Mock data, E-learning
How to use Python and R with RDF Data
•• intermediateComputer science Data management FAIR data Medical informatics Query and retrieval Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph Python R GraphDB -
Video, Training materials with mock data, e-learning
Querying Data with SPARQL
• beginnerComputer science Data management FAIR data Medical informatics Data mining Query and retrieval Database search Data handling Data retrieval Clinical data SPARQL Query data RDF Knowledge graph SNOMED CT LOINC Interoperability -
Text-mining exercises
•• intermediateMicrobial ecology Metagenomics Natural language processing Data mining -
Health data research infrastructures
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PhenoMeNal: accessing metabolomics workflows in Galaxy
• beginnerMetabolomics Chemical biology Galaxy -
RNA-seq data analysis: from raw reads to differentially expressed genes
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RNA-seq Analysis 2014 Module 4 - Isoform discovery and alternative expression