Training materials
Scientific topics: Data architecture, analysis and design or Image analysis or Phenomics or Transcriptomics
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slides
Slides for 'Clustering 3K PBMCs with Scanpy' tutorial
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slides
Slides for 'Dealing with Cross-Contamination in Fixed Barcode Protocols' tutorial
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slides
Slides for 'An introduction to scRNA-seq data analysis' tutorial
•• intermediateTranscriptomics single-cell español -
slides
Introduction to 'Transcriptomics'
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Presentation
Reproducible analysis
• beginnerData architecture, analysis and design Workflows Literate programming Reproducible Science Data analysis -
Video, Slides
Plant Phenotyping Data managment Webinar (MIAPPE)
• beginnerPlant biology Phenomics Data quality management Data submission, annotation, and curation Standardisation and normalisation -
Video
A common framework for designing portable federated pipelines
•• intermediateData architecture, analysis and design data access federated data analysis -
Video
Data Gravity in the Life Sciences: Lessons learned from the HCA and other federated data projects
•• intermediateData architecture, analysis and design Cloud computing Data analysis Standards Translational research -
Presentation
Reproducible data analysis with RStudio, github and Rmarkdown
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Training materials
Plant Phenotyping Data managment (MIAPPE)
• beginnerPhenomics Plant biology Data management Annotation Formatting Plant Phenotyping Data-format data sharing