A common framework for designing portable federated pipelines
This video describes a common framework for designing portable federated pipelines. The joint cohort genotyping pipeline is provided as a specific implementation example. The ability of the pipeline to run in different environments, accessing the data via different protocols, and applying the appropriate normalisations is demonstrated.
Extensive documentation can be found in this github repository: https://github.com/CINECA-project/wp4-federated-joint-cohort-analysis/tree/master/4.3-pipelines/demonstrators/4.3.1-genotyping
Licence: Creative Commons Attribution Non Commercial Share Alike 4.0 International
Keywords: data access, federated data analysis
Resource type: Video
Contributors: Alvaro Gonzalez
Scientific topics: Data architecture, analysis and design