Training materials
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hands-on tutorial
Hands-on for 'Pathogen detection from (direct Nanopore) sequencing data using Galaxy - Foodborne Edition' tutorial
• beginnerMetagenomics metagenomics Nanopore data analysis Pathogens detection Phylogenetic tree Heatmap cyoa -
hands-on tutorial
Hands-on for 'Refining Genome Annotations with Apollo (eukaryotes)' tutorial
•• intermediategenome-annotation eukaryote cyoa -
hands-on tutorial
Hands-on for 'From NCBI's Sequence Read Archive (SRA) to Galaxy: SARS-CoV-2 variant analysis' tutorial
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hands-on tutorial
Hands-on for 'Mutation calling, viral genome reconstruction and lineage/clade assignment from SARS-CoV-2 sequencing data' tutorial
•• intermediateGenetic variation variant-analysis covid19 virology one-health -
hands-on tutorial
Hands-on for 'Trio Analysis using Synthetic Datasets from RD-Connect GPAP' tutorial
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hands-on tutorial
Hands-on for 'Training Infrastructure as a Service' tutorial
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hands-on tutorial
Hands-on for 'Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads' tutorial
•• intermediateSequence assembly assembly covid19 -
hands-on tutorial
Hands-on for 'Reference-based RNA-Seq data analysis' tutorial
• beginnerTranscriptomics transcriptomics bulk rna-seq collections drosophila QC cyoa -
hands-on tutorial
Hands-on for 'SQL with R' tutorial
•• intermediateSoftware engineering data-science SQL R jupyter-notebook rmarkdown-notebook -
hands-on tutorial
Hands-on for 'SQL with Python' tutorial
•• intermediateSoftware engineering data-science SQL Python jupyter-notebook