Training materials
Difficulty level: Beginner
and Scientific topics: Toxicology or Cell biology or Systems biology or Computational biology
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Bioinformatics, Computational Biology, Computer Science, Programming, Coding, Education
R for Beginners
• beginnerBioinformatics Computational biology Computer science Coding Programming -
e-learning
ISMARA: A tool to infer genome-wide regulatory interactions
• beginnerSystems biology Gene regulation Transcription factors and regulatory sites Computational modelling -
Video
Metabolic Control Analysis in COPASI
• beginnerSimulation experiment Systems biology Modelling and simulation Analysis Visualisation SystemsBiology ComputationalBiology Computational modelling Kinetic modeling COPASI -
Video
Steady State Analysis in COPASI
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation Visualisation -
Tutorial, hands-on tutorial
WikiPathways Academy
• beginnerBiology Systems biology Pathway WikiPathways Biocuration -
Tutorial, Documentation
runBioSimulations tutorial and help
• beginnerSystems biology Computational biology Simulation experiment Modelling and simulation biosimulators COMBINE OMEX SED-ML Modeling dynamic simulations SBML BNGL -
Tutorial
Datanator tutorial
• beginnerMolecular biology Cell biology Systems biology Bioinformatics Omics Query and retrieval Filtering genomics Proteomics transcriptomics Metabolomics reaction kinetics Kinetic modeling meta analysis -
Documentation, API reference
bio.tools documentation
• beginnerBioinformatics Data submission, annotation, and curation Computational biology Ontology and terminology Data retrieval Tools Curation Software Sofware curation Tool curation -
Tutorial
OpenRiskNet: Ontology Walkthrough and Workshop
• beginnerToxicology Ontology and terminology -
Train the trainer
• beginnerComputational biology Bioinformatics training pedagogy