Training materials
Difficulty level: Beginner
and Scientific topics: Biomarkers or Protein modifications or Protein structure analysis or Sequence assembly or Workflows
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hands-on tutorial
Explore Protein Structures with ChimeraX
• beginnerProtein structure analysis Sequence analysis Structure visualisation ChimeraX Protein Structure analysis -
course materials, Online material, Training materials
Cloud-SPAN Genomics
• beginnerBioinformatics Software engineering Genomics DNA polymorphism Workflows Data architecture, analysis and design Shell Command line Cloud computing HPC Data analysis High performance computing -
slides
Slides for 'Genome assembly quality control.' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'Unicycler Assembly' tutorial
• beginnerSequence assembly assembly prokaryote -
hands-on tutorial
Hands-on for 'An Introduction to Genome Assembly' tutorial
• beginnerSequence assembly assembly -
hands-on tutorial
Hands-on for 'De Bruijn Graph Assembly' tutorial
• beginnerSequence assembly assembly -
slides
Slides for 'An introduction to get started in genome assembly and annotation' tutorial
• beginnerSequence assembly assembly -
Carpentries style curriculum
Introduction to Workflows with Common Workflow Language
• beginnerWorkflows RNA-Seq analysis cwl commonwl sciworkflows workflows -
Presentation, course materials
Introduction to Nextflow workshop
• beginnerWorkflows Nextflow DSL2 -
Computer Software, workflow
How to use V-pipe (SARS-CoV-2 data)
• beginnerVirology Genetic variation Workflows Variant calling Alignment Read pre-processing coronavirus NGS bioinformatics Variant-calling
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